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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs56064712 chr8:10121588 A/G SGK223 chr8:8175258-8244008:- 0.36 5.91 6.43E-9 Box Plot
THCA rs56065176 chr10:88950646 A/C FAM35B chr10:46897641-46939143:+ 0.61 9.95 2.51E-21 Box Plot
THCA rs56071381 chr10:45907136 G/T AGAP8 chr10:51224681-51371321:- 0.42 6.36 4.68E-10 Box Plot
THCA rs56073903 chr12:94738317 A/ACTATATTTC C6orf176 chr6:166337536-166401527:- -0.53 -5.93 5.86E-9 Box Plot
THCA rs56075693 chr6:28290328 T/G BTN3A2 chr6:26365387-26378548:+ -0.82 -11.75 3.4E-28 Box Plot
THCA rs56075693 chr6:28290328 T/G RNF5P1 chr8:38458179-38458718:- 0.7 6.25 8.95E-10 Box Plot
THCA rs56075693 chr6:28290328 T/G ZFP57 chr6:29640169-29648887:- 0.92 8.87 1.45E-17 Box Plot
THCA rs56076010 chr1:111157433 T/C DLD chr7:107531415-107572175:+ -0.27 -5.89 7.3E-9 Box Plot
THCA rs56090579 chr10:51822496 T/C FAM21B chr10:47894023-47949412:+ 0.48 7.6 1.54E-13 Box Plot
THCA rs56094399 chr8:11797470 G/A SGK223 chr8:8175258-8244008:- 0.39 6.93 1.36E-11 Box Plot
THCA rs56098842 chr6:26833759 C/A ZNF322B chr9:99957633-99961910:- 0.59 10.93 5.57E-25 Box Plot
THCA rs56102998 chr8:11796675 G/A SGK223 chr8:8175258-8244008:- -0.47 -8.73 4.18E-17 Box Plot
THCA rs56106241 chr10:51812826 T/G FAM21B chr10:47894023-47949412:+ 0.55 7.14 3.4E-12 Box Plot
THCA rs56110118 chr6:26762057 TAC/T ZNF322B chr9:99957633-99961910:- 0.7 13.39 6.14E-35 Box Plot
THCA rs56114371 chr6:27274834 C/T RNF5P1 chr8:38458179-38458718:- 0.74 6.54 1.59E-10 Box Plot